BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H03LP1|AL428620
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1686 1720 0.0
>3x_Contig1686
Length = 15382
Score = 1720 bits (865), Expect = 0.0
Identities = 876/881 (99%), Gaps = 1/881 (0%)
Strand = Plus / Plus
Query: 1 cagagactacttacgatagtattcggaaaaacgctaaatatgtacggatagcaatgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 cagagactacttacgatagtattcggaaaaacgctaaatatgtacggatagcaatgcaac 1086
Query: 61 ccagcttcatgaccatgaatgaattaatagtatttgccttactactgaccccgttgttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 ccagcttcatgaccatgaatgaattaatagtatttgccttactactgaccccgttgttag 1146
Query: 121 ctgcaagacaacaatctgttccagggctactgttctcgtacaatctgtaagttgattttw 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1147 ctgcaagacaacaatctgttccagggctactgttctcgtacaatctgtaagttgatttta 1206
Query: 181 aagagttattagcttccaagcttccatgcggtttgtataaacgctaaaggaaccgtgcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 aagagttattagcttccaagcttccatgcggtttgtataaacgctaaaggaaccgtgcat 1266
Query: 241 tgaagacatatgatactaacagttattcggaaatttcagagcgccggggatagtaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 tgaagacatatgatactaacagttattcggaaatttcagagcgccggggatagtaaaata 1326
Query: 301 ccaagataagtatgacaatgcacaactaccacaagatgattttttgaaagttgccaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 ccaagataagtatgacaatgcacaactaccacaagatgattttttgaaagttgccaagga 1386
Query: 361 tttgatctcacagtgtcattcggagacatatgtatttgtwaaccaaccaggtttaagtcg 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1387 tttgatctcacagtgtcattcggagacatatgtatttgtaaaccaaccaggtttaagtcg 1446
Query: 421 aagtgatttcaagcagcataagcmatctatgcacaaattatacaactatgtgctaactag 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1447 aagtgatttcaagcagcataagcaatctatgcacaaattatacaactatgtgctaactag 1506
Query: 481 ttccacgacagt-aaattcgaaaagattgatatagtccaaaacgatgatatttacgaaga 539
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 ttccacgacagtgaaattcgaaaagattgatatagtccaaaacgatgatatttacgaaga 1566
Query: 540 attgatcgcctatacaatggataaatgtaatattgatgataaaatagatataggtggcaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 attgatcgcctatacaatggataaatgtaatattgatgataaaatagatataggtggcaa 1626
Query: 600 tgtcacagacaggtatcaaccatttgtggaggcccgaactagagttctaagggtagactt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 tgtcacagacaggtatcaaccatttgtggaggcccgaactagagttctaagggtagactt 1686
Query: 660 cccacctttaccgcagcaaggacaatacgtagagggcatcgggaccagaaaagatgtgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 cccacctttaccgcagcaaggacaatacgtagagggcatcgggaccagaaaagatgtgtt 1746
Query: 720 gcaagccaatgatgaatacttgagatatgttatgggaacgttaccaaccccgaaacatac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 gcaagccaatgatgaatacttgagatatgttatgggaacgttaccaaccccgaaacatac 1806
Query: 780 agttttttatatgtctttggaaaagagtgaagtgccagataccgagacatctttatcgta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 agttttttatatgtctttggaaaagagtgaagtgccagataccgagacatctttatcgta 1866
Query: 840 tgatatctggcctgahatatttacgaatccacaacgaaagg 880
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1867 tgatatctggcctgaaatatttacgaatccacaacgaaagg 1907
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5446
Number of Sequences: 1807
Number of extensions: 5446
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)